net.maizegenetics.analysis.distance

Class MultiDimensionalScalingPlugin

AbstractPlugin

net.maizegenetics.analysis.distance.MultiDimensionalScalingPlugin

All Implemented Interfaces:

Plugin, PluginListener, ProgressListener

public class MultiDimensionalScalingPlugin
extends AbstractPlugin

Constructor Detail

MultiDimensionalScalingPlugin

public MultiDimensionalScalingPlugin(java.awt.Frame parent,
                                     boolean interactive)

Method Detail

processData

public DataSet processData(DataSet input)

getIcon

public javax.swing.ImageIcon getIcon()

getButtonName

public java.lang.String getButtonName()

getToolTipText

public java.lang.String getToolTipText()

pluginDescription

public java.lang.String pluginDescription()

pluginUserManualURL

public java.lang.String pluginUserManualURL()

numberOfAxes

public java.lang.Integer numberOfAxes()

The number of axes or dimensions and associated eigenvalues to be returned by the analysis.

Returns:

org.jetbrains.dokka.NodeRenderContent@5ce1eb63: Number of Axes

numberOfAxes

public MultiDimensionalScalingPlugin numberOfAxes(java.lang.Integer value)

Set Number of Axes. The number of axes or dimensions and associated eigenvalues to be returned by the analysis.

Parameters:

value - Number of Axes

Returns:

org.jetbrains.dokka.NodeRenderContent@34140b9d: this plugin

removeNaN

public java.lang.Boolean removeNaN()

Remove NaNs from matrix before performing MDS

Returns:

org.jetbrains.dokka.NodeRenderContent@685dd441: Remove NaNs

removeNaN

public MultiDimensionalScalingPlugin removeNaN(java.lang.Boolean value)

Set Remove NaNs. Remove NaNs from matrix before performing MDS

Parameters:

value - Remove NaNs

Returns:

org.jetbrains.dokka.NodeRenderContent@26d82037: this plugin