net.maizegenetics.analysis.gbs

Class TagAgainstAnchorPlugin

AbstractPlugin

net.maizegenetics.analysis.gbs.TagAgainstAnchorPlugin

All Implemented Interfaces:

Plugin, PluginListener, ProgressListener

public class TagAgainstAnchorPlugin
extends AbstractPlugin

Genetic mapping of GBS tags. Steps: 1. Using -pc and -t option to calculate the number of TBT chunks. 2. When -pc is 0, run the program on cluster. Submit jobs to nodes by specifying chunkStartIndex and chunkEndIndex

Constructor Detail

TagAgainstAnchorPlugin

public TagAgainstAnchorPlugin()

TagAgainstAnchorPlugin

public TagAgainstAnchorPlugin(java.awt.Frame parentFrame)

Method Detail

performFunction

public DataSet performFunction(DataSet input)

setParameters

public void setParameters(java.lang.String[] args)

getIcon

public javax.swing.ImageIcon getIcon()

getButtonName

public java.lang.String getButtonName()

getToolTipText

public java.lang.String getToolTipText()