net.maizegenetics.dna.map

Class PETagsOnPhysicalMap

AbstractPETags

AbstractPETagsOnPhysicalMap

net.maizegenetics.dna.map.PETagsOnPhysicalMap

All Implemented Interfaces:

PETags

public class PETagsOnPhysicalMap
extends AbstractPETagsOnPhysicalMap

Constructor Detail

PETagsOnPhysicalMap

public PETagsOnPhysicalMap(java.lang.String infileS,
                           net.maizegenetics.dna.tag.TagsByTaxa.FilePacking format)

PETagsOnPhysicalMap

public PETagsOnPhysicalMap(PETagCounts ptc,
                           java.lang.String fSamFileS,
                           java.lang.String bSamFileS,
                           java.lang.String contigSamFileS)

Method Detail

readDistFile

public void readDistFile(java.lang.String infileS,
                         net.maizegenetics.dna.tag.TagsByTaxa.FilePacking format)

writeDistFile

public void writeDistFile(java.lang.String outfileS,
                          net.maizegenetics.dna.tag.TagsByTaxa.FilePacking format)