net.maizegenetics.dna.map

Class TagGeneticMappingInfo

net.maizegenetics.dna.map.TagGeneticMappingInfo

public class TagGeneticMappingInfo

Class used to to store genetic mapping for hypothesis and output to H5 format

Field Detail

p

public double p

P-value from binomial test

chromosome

public int chromosome

Chromosome of the most significant site

position

public int position

Position of the most significant site

sigSiteNum

public int sigSiteNum

Number of sites passing P-value threshold

sigSiteRange

public int sigSiteRange

Range of sites passing P-value threshold, for the first significant site to the last

Constructor Detail

TagGeneticMappingInfo

public TagGeneticMappingInfo()

TagGeneticMappingInfo

public TagGeneticMappingInfo(double p,
                             int chromosome,
                             int position,
                             int sigSiteNum,
                             int sigSiteRange)