Hierarchy For Package net.maizegenetics.dna.snp.genotypecall

Package Hierarchies:

• All Packages

Class Hierarchy

• net.maizegenetics.dna.snp.genotypecall.LineIndexHapmapGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.ListStats
  • net.maizegenetics.dna.snp.genotypecall.ListStatsFilterSite
  • net.maizegenetics.dna.snp.genotypecall.ListStatsFilterTaxa
  • net.maizegenetics.dna.snp.genotypecall.ListStatsSite
  • net.maizegenetics.dna.snp.genotypecall.ListStatsTaxa
• net.maizegenetics.dna.snp.genotypecall.AlleleFreqCache
• net.maizegenetics.dna.snp.genotypecall.Stats
• net.maizegenetics.dna.snp.genotypecall.DifferenceGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.GenotypeCallTableBuilder
• net.maizegenetics.dna.snp.genotypecall.HybridGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.GOBIIAvroGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.CombineGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.SetToNGenotypeMergeRule (implements net.maizegenetics.dna.snp.genotypecall.GenotypeMergeRule)
• net.maizegenetics.dna.snp.genotypecall.MaskedGenotypes
• net.maizegenetics.dna.snp.genotypecall.HighestDepthGenotypeMergeRule (implements net.maizegenetics.dna.snp.genotypecall.GenotypeMergeRule)
• net.maizegenetics.dna.snp.genotypecall.BasicGenotypeMergeRule (implements net.maizegenetics.dna.snp.genotypecall.GenotypeMergeRule)
• net.maizegenetics.dna.snp.genotypecall.GOBIIGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.ProjectionGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.MaskGenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.MergedGenotypeCallTable

Interface Hierarchy

• net.maizegenetics.dna.snp.genotypecall.GenotypeCallTable
• net.maizegenetics.dna.snp.genotypecall.GenotypeMergeRule