net.maizegenetics.dna.snp.score

Class DosageBuilder

net.maizegenetics.dna.snp.score.DosageBuilder

public class DosageBuilder

Method Detail

getInstance

public static DosageBuilder getInstance(ch.systemsx.cisd.hdf5.IHDF5Writer writer,
                                        int numTaxa,
                                        int numSites,
                                        TaxaList taxaList)

getInstance

public static DosageBuilder getInstance(int numTaxa,
                                        int numSites,
                                        TaxaList taxaList)

getFilteredInstance

public static Dosage getFilteredInstance(Dosage base,
                                         Translate translate)

getMaskInstance

public static Dosage getMaskInstance(Dosage base,
                                     MaskMatrix mask)

getInstance

public static Dosage getInstance(ch.systemsx.cisd.hdf5.IHDF5Reader reader)

addTaxon

public DosageBuilder addTaxon(int taxon,
                              kotlin.Array[] values)

build

public Dosage build()