net.maizegenetics.phenotype

Class CategoricalAttribute

net.maizegenetics.phenotype.CategoricalAttribute

All Implemented Interfaces:

PhenotypeAttribute

public class CategoricalAttribute
implements PhenotypeAttribute

Field Detail

missingValue

public static java.lang.String missingValue

See Also:

Constant Field Values

Constructor Detail

CategoricalAttribute

public CategoricalAttribute(java.lang.String name,
                            java.lang.String[] stringValues)

Method Detail

intValue

public int intValue(int obs)

Parameters:

obs - the observation number

Returns:

org.jetbrains.dokka.NodeRenderContent@2070ec9f: zero-based index of category levels for this observation; -1 = missing value

allIntValues

public kotlin.Array[] allIntValues()

Returns:

org.jetbrains.dokka.NodeRenderContent@29a871d0: zero-based category level index for each observation; -1 = missing value

attributeLabelForIndex

public java.lang.String attributeLabelForIndex(int index)

Parameters:

index - a zero-based category level index

Returns:

org.jetbrains.dokka.NodeRenderContent@3c0a7a5c: the String label for this level

indexForAttrLabel

public int indexForAttrLabel(java.lang.String label)

Parameters:

label - the name of a Category level

Returns:

org.jetbrains.dokka.NodeRenderContent@7da7891f: the zero-based category level index for this name

label

public java.lang.String label(int obs)

Parameters:

obs - the observation number

Returns:

org.jetbrains.dokka.NodeRenderContent@5a148620: the name of the Category for this observation

allLabels

public java.lang.String[] allLabels()

Returns:

org.jetbrains.dokka.NodeRenderContent@30d84a43: the Category names for all observations

labelList

public java.util.List<java.lang.String> labelList()

Returns:

org.jetbrains.dokka.NodeRenderContent@5fef0e9e: a list each unique Category name ordered by index

numberOfLevels

public int numberOfLevels()

Returns:

org.jetbrains.dokka.NodeRenderContent@1e418b0d: the number of Category levels

whichObservations

public kotlin.Array[] whichObservations(int level)

Parameters:

level -

Returns:

org.jetbrains.dokka.NodeRenderContent@601a3b63: the observation numbers corresponding to this level index

whichObservations

public kotlin.Array[] whichObservations(java.lang.String factorName)

Parameters:

factorName - the name of a Category level

Returns:

org.jetbrains.dokka.NodeRenderContent@1262ff71: the observation numbers corresponding to this name

value

public java.lang.Object value(int obs)

allValues

public java.lang.Object allValues()

subset

public PhenotypeAttribute subset(kotlin.Array[] obs,
                                 java.lang.String newName)

changeName

public PhenotypeAttribute changeName(java.lang.String newName)

isMissing

public boolean isMissing(int obs)

missing

public BitSet missing()

name

public java.lang.String name()

size

public int size()

getCompatibleTypes

public java.util.List<net.maizegenetics.phenotype.Phenotype.ATTRIBUTE_TYPE> getCompatibleTypes()

isTypeCompatible

public boolean isTypeCompatible(net.maizegenetics.phenotype.Phenotype.ATTRIBUTE_TYPE type)

toString

public java.lang.String toString()