Hierarchy For Package net.maizegenetics.analysis.gbs.repgen

Package Hierarchies:

• All Packages

Class Hierarchy

• net.maizegenetics.analysis.gbs.repgen.AlignmentInfo
• net.maizegenetics.analysis.gbs.repgen.TagCorrelationInfo
• net.maizegenetics.plugindef.AbstractPlugin (implements net.maizegenetics.plugindef.Plugin)
  • net.maizegenetics.analysis.gbs.repgen.RGBSProductionSNPCallerPlugin
  • net.maizegenetics.analysis.gbs.repgen.RampSeqAlignFromBlastTags
  • net.maizegenetics.analysis.gbs.repgen.RepGenAlignerPlugin
  • net.maizegenetics.analysis.gbs.repgen.RepGenLDAnalysisPlugin
  • net.maizegenetics.analysis.gbs.repgen.RepGenLoadSeqToDBPlugin
  • net.maizegenetics.analysis.gbs.repgen.RepGenPhase2AlignerPlugin
• net.maizegenetics.analysis.gbs.repgen.RefTagData
• net.maizegenetics.analysis.gbs.repgen.RepGenLoadSeqToDBPlugin.TagCountQualityScoreMap

Enum Hierarchy

• net.maizegenetics.analysis.gbs.repgen.RepGenPhase2AlignerPlugin.BestScore