net.maizegenetics.analysis.rna

Class FindMatchByWordHash.Builder

net.maizegenetics.analysis.rna.FindMatchByWordHash.Builder

Enclosing class:

FindMatchByWordHash

public static class FindMatchByWordHash.Builder

Constructor Detail

Builder

public Builder(java.util.Set<net.maizegenetics.dna.tag.Tag> tagSet)

Method Detail

matchType

public net.maizegenetics.analysis.rna.FindMatchByWordHash.Builder matchType(net.maizegenetics.analysis.rna.FindMatchByWordHash.MatchType matchType)

wordLength

public net.maizegenetics.analysis.rna.FindMatchByWordHash.Builder wordLength(int wordLength)

maxWordCopies

public net.maizegenetics.analysis.rna.FindMatchByWordHash.Builder maxWordCopies(int maxWordCopies)

searchBiDirectional

public net.maizegenetics.analysis.rna.FindMatchByWordHash.Builder searchBiDirectional(boolean searchBiDirectional)

build

public FindMatchByWordHash build()