net.maizegenetics.dna.snp

Interfaces

• Allele
• Filter
• GenotypeTable
• MaskMatrix

Classes

• AbstractMaskMatrix
• CombineGenotypeTable
• CoreGenotypeTable
• ExportUtils
• FilterAndMaskGVCFGenomeSequence
• FilterGenotypeTable
• FilterList
• FilterSite
• FilterTableReport
• FilterTaxa
• GenotypeTableBuilder
• GenotypeTableUtils
• HapMapHDF5Constants
• ImportUtils
• MaskGenotypeMatrix
• MaskGenotypeStatsMatrix
• MaskMatrixBuilder
• MaskSiteMatrix
• MaskTaxaMatrix
• MergedGenotypeTable
• NucleotideAlignmentConstants
• ProjectionBuilder
• ReadSequenceAlignmentUtils
• SimpleAllele
• TOPMGenotypeTable
• Translate
• TranslateBuilder
• TranslateIndex
• TranslateIndexBuilder
• TranslateIndexRange
• TranslateIndexRedirect
• TranslateIndexRedirectUnordered
• TranslateNegative