public class DistanceMatrixBuilder
public static java.lang.String MATRIX_TYPE
public static java.lang.String MATRIX_ALGORITHM_VARIATION
public static java.lang.String CENTERED_IBS_SUMPK
public static java.lang.String IBS_DISTANCE_MATRIX_TYPE
public static java.lang.String IBS_DISTANCE_MATRIX_NUM_ALLELES
public static java.lang.String IBS_DISTANCE_MATRIX_AVE_TOTAL_SITES
public static java.lang.String IBS_DISTANCE_MATRIX_TRUE_IBS
public static DistanceMatrixBuilder getInstance(TaxaList taxa)
public static DistanceMatrixBuilder getInstance(int numTaxa)
public void set(int x,
int y,
float value)
public void set(int x,
int y,
double value)
public void addTaxon(Taxon taxon)
public DistanceMatrixBuilder annotation(GeneralAnnotation annotation)
public void setCount(int x,
int y,
int value)
public DistanceMatrix build()