net.maizegenetics.taxa.distance

Class WriteDistanceMatrix

net.maizegenetics.taxa.distance.WriteDistanceMatrix

public class WriteDistanceMatrix

Method Detail

saveDelimitedDistanceMatrix

public static void saveDelimitedDistanceMatrix(DistanceMatrix matrix,
                                               java.lang.String saveFile)

saveRawMultiBlupMatrix

public static void saveRawMultiBlupMatrix(DistanceMatrix matrix,
                                          java.lang.String filename)

saveRawMultiBlupMatrix

public static void saveRawMultiBlupMatrix(DistanceMatrix matrix,
                                          java.lang.String taxaFile,
                                          java.lang.String matrixFile)

saveBinMultiBlupMatrix

public static void saveBinMultiBlupMatrix(DistanceMatrix matrix,
                                          java.lang.String filename)

saveBinMultiBlupMatrix

public static void saveBinMultiBlupMatrix(DistanceMatrix matrix,
                                          java.lang.String taxaFile,
                                          java.lang.String matrixFile,
                                          java.lang.String countFile)

saveMultiBlupIDs

public static void saveMultiBlupIDs(java.lang.String filename,
                                    TaxaList taxa)

saveBinMultiBlupCounts

public static void saveBinMultiBlupCounts(java.lang.String filename,
                                          DistanceMatrix matrix)

saveDARwinMatrix

public static void saveDARwinMatrix(DistanceMatrix matrix,
                                    java.lang.String saveFile)

saveDARwinMatrix

public static void saveDARwinMatrix(DistanceMatrix matrix,
                                    java.lang.String donFile,
                                    java.lang.String disFile)

saveDARwinIDs

public static void saveDARwinIDs(java.lang.String filename,
                                 TaxaList taxa)