net.maizegenetics.taxa.tree

Class TreeClusters

net.maizegenetics.taxa.tree.TreeClusters

public class TreeClusters

Constructor Detail

TreeClusters

public TreeClusters(Tree theTree)

Method Detail

getGroups

public kotlin.Array[] getGroups(int numberOfGroups)

For a given number of groups this function returns the group membership for each taxon.

Parameters:

numberOfGroups - the number of groups desired

Returns:

org.jetbrains.dokka.NodeRenderContent@54558b5a: an array of integers indicating the group of each taxon

getGroups

public kotlin.Array[] getGroups(double height)

This function returns taxa group membership when the tree is cut at the designated height.

Parameters:

height - the height at which the tree is cut

Returns:

org.jetbrains.dokka.NodeRenderContent@5bf724ec: the group membership of each taxon

setNodeToGroup

public void setNodeToGroup(Node aNode,
                           int group,
                           kotlin.Array[] groups)