Uses of Class
org.bytedeco.javacpp.lept.L_DNA

Packages that use lept.L_DNA

Package	Description
org.bytedeco.javacpp

Uses of lept.L_DNA in org.bytedeco.javacpp

Methods in org.bytedeco.javacpp that return lept.L_DNA

Modifier and Type	Method and Description
lept.L_DNA	lept.L_DNA.array(DoublePointer array)
static lept.L_DNA	lept.arrayFindEachSequence(byte[] data, long datalen, byte[] sequence, long seqlen)
static lept.L_DNA	lept.arrayFindEachSequence(ByteBuffer data, long datalen, ByteBuffer sequence, long seqlen)
static lept.L_DNA	lept.arrayFindEachSequence(BytePointer data, long datalen, BytePointer sequence, long seqlen)
lept.L_DNA	lept.L_DNA.delx(double delx)
lept.L_DNA	lept.L_RECOG.dna_tochar()
lept.L_DNA	lept.L_DNAA.dna(int i)
lept.L_DNA	lept.L_DNAHASH.dna(int i)
static lept.L_DNA	lept.l_dnaaGetDna(lept.L_DNAA daa, int index, int accessflag)
static lept.L_DNA	lept.l_dnaClone(lept.L_DNA da)
static lept.L_DNA	lept.l_dnaCopy(lept.L_DNA da)
static lept.L_DNA	lept.l_dnaCreate(int n)
static lept.L_DNA	lept.l_dnaCreateFromDArray(double[] darray, int size, int copyflag)
static lept.L_DNA	lept.l_dnaCreateFromDArray(DoubleBuffer darray, int size, int copyflag)
static lept.L_DNA	lept.l_dnaCreateFromDArray(DoublePointer darray, int size, int copyflag)
static lept.L_DNA	lept.l_dnaCreateFromIArray(int[] iarray, int size)
static lept.L_DNA	lept.l_dnaCreateFromIArray(IntBuffer iarray, int size)
static lept.L_DNA	lept.l_dnaCreateFromIArray(IntPointer iarray, int size)
static lept.L_DNA	lept.l_dnaHashGetDna(lept.L_DNAHASH dahash, int key, int copyflag)
static lept.L_DNA	lept.l_dnaIntersectionByHash(lept.L_DNA da1, lept.L_DNA da2)
static lept.L_DNA	lept.l_dnaMakeDelta(lept.L_DNA das)
static lept.L_DNA	lept.l_dnaMakeSequence(double startval, double increment, int size)
static lept.L_DNA	lept.l_dnaRead(BytePointer filename)
static lept.L_DNA	lept.l_dnaRead(String filename)
static lept.L_DNA	lept.l_dnaReadStream(Pointer fp)
lept.L_DNA	lept.L_DNA.n(int n)
lept.L_DNA	lept.L_DNA.nalloc(int nalloc)
static lept.L_DNA	lept.numaConvertToDna(lept.NUMA na)
lept.L_DNA	lept.L_PDF_DATA.objloc()
lept.L_DNA	lept.L_PDF_DATA.objsize()
lept.L_DNA	lept.L_DNA.position(long position)
lept.L_DNA	lept.L_DNA.refcount(int refcount)
lept.L_DNA	lept.L_DNA.startx(double startx)

Methods in org.bytedeco.javacpp with parameters of type lept.L_DNA

Modifier and Type	Method and Description
lept.L_RECOG	lept.L_RECOG.dna_tochar(lept.L_DNA dna_tochar)
lept.L_DNAA	lept.L_DNAA.dna(int i, lept.L_DNA dna)
lept.L_DNAHASH	lept.L_DNAHASH.dna(int i, lept.L_DNA dna)
static int	lept.l_byteaFindEachSequence(lept.L_BYTEA ba, byte[] sequence, int seqlen, lept.L_DNA pda)
static int	lept.l_byteaFindEachSequence(lept.L_BYTEA ba, ByteBuffer sequence, int seqlen, lept.L_DNA pda)
static int	lept.l_byteaFindEachSequence(lept.L_BYTEA ba, BytePointer sequence, int seqlen, lept.L_DNA pda)
static int	lept.l_dnaaAddDna(lept.L_DNAA daa, lept.L_DNA da, int copyflag)
static int	lept.l_dnaAddNumber(lept.L_DNA da, double val)
static int	lept.l_dnaaReplaceDna(lept.L_DNAA daa, int index, lept.L_DNA da)
static int	lept.l_dnaChangeRefcount(lept.L_DNA da, int delta)
static lept.L_DNA	lept.l_dnaClone(lept.L_DNA da)
static lept.NUMA	lept.l_dnaConvertToNuma(lept.L_DNA da)
static lept.L_DNA	lept.l_dnaCopy(lept.L_DNA da)
static int	lept.l_dnaCopyParameters(lept.L_DNA dad, lept.L_DNA das)
static void	lept.l_dnaDestroy(lept.L_DNA pda)
static int	lept.l_dnaEmpty(lept.L_DNA da)
static int	lept.l_dnaFindValByHash(lept.L_DNA da, lept.L_DNAHASH dahash, double val, int[] pindex)
static int	lept.l_dnaFindValByHash(lept.L_DNA da, lept.L_DNAHASH dahash, double val, IntBuffer pindex)
static int	lept.l_dnaFindValByHash(lept.L_DNA da, lept.L_DNAHASH dahash, double val, IntPointer pindex)
static int	lept.l_dnaGetCount(lept.L_DNA da)
static DoublePointer	lept.l_dnaGetDArray(lept.L_DNA da, int copyflag)
static int	lept.l_dnaGetDValue(lept.L_DNA da, int index, double[] pval)
static int	lept.l_dnaGetDValue(lept.L_DNA da, int index, DoubleBuffer pval)
static int	lept.l_dnaGetDValue(lept.L_DNA da, int index, DoublePointer pval)
static IntPointer	lept.l_dnaGetIArray(lept.L_DNA da)
static int	lept.l_dnaGetIValue(lept.L_DNA da, int index, int[] pival)
static int	lept.l_dnaGetIValue(lept.L_DNA da, int index, IntBuffer pival)
static int	lept.l_dnaGetIValue(lept.L_DNA da, int index, IntPointer pival)
static int	lept.l_dnaGetParameters(lept.L_DNA da, double[] pstartx, double[] pdelx)
static int	lept.l_dnaGetParameters(lept.L_DNA da, DoubleBuffer pstartx, DoubleBuffer pdelx)
static int	lept.l_dnaGetParameters(lept.L_DNA da, DoublePointer pstartx, DoublePointer pdelx)
static int	lept.l_dnaGetRefcount(lept.L_DNA da)
static lept.L_DNAHASH	lept.l_dnaHashCreateFromDna(lept.L_DNA da)
static int	lept.l_dnaInsertNumber(lept.L_DNA da, int index, double val)
static lept.L_DNA	lept.l_dnaIntersectionByHash(lept.L_DNA da1, lept.L_DNA da2)
static int	lept.l_dnaJoin(lept.L_DNA dad, lept.L_DNA das, int istart, int iend)
static lept.L_DNA	lept.l_dnaMakeDelta(lept.L_DNA das)
static int	lept.l_dnaMakeHistoByHash(lept.L_DNA das, lept.L_DNAHASH pdahash, lept.L_DNA pdav, lept.L_DNA pdac)
static int	lept.l_dnaMakeHistoByHash(lept.L_DNA das, PointerPointer pdahash, PointerPointer pdav, PointerPointer pdac)
static int	lept.l_dnaRemoveDupsByHash(lept.L_DNA das, lept.L_DNA pdad, lept.L_DNAHASH pdahash)
static int	lept.l_dnaRemoveDupsByHash(lept.L_DNA das, PointerPointer pdad, PointerPointer pdahash)
static int	lept.l_dnaRemoveNumber(lept.L_DNA da, int index)
static int	lept.l_dnaReplaceNumber(lept.L_DNA da, int index, double val)
static int	lept.l_dnaSetCount(lept.L_DNA da, int newcount)
static int	lept.l_dnaSetParameters(lept.L_DNA da, double startx, double delx)
static int	lept.l_dnaSetValue(lept.L_DNA da, int index, double val)
static int	lept.l_dnaShiftValue(lept.L_DNA da, int index, double diff)
static int	lept.l_dnaWrite(BytePointer filename, lept.L_DNA da)
static int	lept.l_dnaWrite(String filename, lept.L_DNA da)
static int	lept.l_dnaWriteStream(Pointer fp, lept.L_DNA da)
lept.L_PDF_DATA	lept.L_PDF_DATA.objloc(lept.L_DNA objloc)
lept.L_PDF_DATA	lept.L_PDF_DATA.objsize(lept.L_DNA objsize)