| Package | Description |
|---|---|
| org.bytedeco.javacpp |
| Modifier and Type | Method and Description |
|---|---|
lept.L_DNA |
lept.L_DNA.array(org.bytedeco.javacpp.DoublePointer array) |
static lept.L_DNA |
lept.arrayFindEachSequence(byte[] data,
long datalen,
byte[] sequence,
long seqlen) |
static lept.L_DNA |
lept.arrayFindEachSequence(ByteBuffer data,
long datalen,
ByteBuffer sequence,
long seqlen) |
static lept.L_DNA |
lept.arrayFindEachSequence(org.bytedeco.javacpp.BytePointer data,
long datalen,
org.bytedeco.javacpp.BytePointer sequence,
long seqlen) |
lept.L_DNA |
lept.L_DNA.delx(double delx) |
lept.L_DNA |
lept.L_RECOG.dna_tochar()
index-to-char lut for arbitrary charset
|
lept.L_DNA |
lept.L_DNAA.dna(int i)
array of L_Dna
|
lept.L_DNA |
lept.L_DNAHASH.dna(int i)
array of L_Dna
|
static lept.L_DNA |
lept.l_dnaaFlattenToDna(lept.L_DNAA daa) |
static lept.L_DNA |
lept.l_dnaaGetDna(lept.L_DNAA daa,
int index,
int accessflag) |
static lept.L_DNA |
lept.l_dnaClone(lept.L_DNA da) |
static lept.L_DNA |
lept.l_dnaCopy(lept.L_DNA da) |
static lept.L_DNA |
lept.l_dnaCreate(int n) |
static lept.L_DNA |
lept.l_dnaCreateFromDArray(double[] darray,
int size,
int copyflag) |
static lept.L_DNA |
lept.l_dnaCreateFromDArray(DoubleBuffer darray,
int size,
int copyflag) |
static lept.L_DNA |
lept.l_dnaCreateFromDArray(org.bytedeco.javacpp.DoublePointer darray,
int size,
int copyflag) |
static lept.L_DNA |
lept.l_dnaCreateFromIArray(int[] iarray,
int size) |
static lept.L_DNA |
lept.l_dnaCreateFromIArray(IntBuffer iarray,
int size) |
static lept.L_DNA |
lept.l_dnaCreateFromIArray(org.bytedeco.javacpp.IntPointer iarray,
int size) |
static lept.L_DNA |
lept.l_dnaDiffAdjValues(lept.L_DNA das) |
static lept.L_DNA |
lept.l_dnaHashGetDna(lept.L_DNAHASH dahash,
int key,
int copyflag) |
static lept.L_DNA |
lept.l_dnaIntersectionByAset(lept.L_DNA da1,
lept.L_DNA da2) |
static lept.L_DNA |
lept.l_dnaIntersectionByHash(lept.L_DNA da1,
lept.L_DNA da2) |
static lept.L_DNA |
lept.l_dnaMakeSequence(double startval,
double increment,
int size) |
static lept.L_DNA |
lept.l_dnaRead(org.bytedeco.javacpp.BytePointer filename) |
static lept.L_DNA |
lept.l_dnaRead(String filename) |
static lept.L_DNA |
lept.l_dnaReadStream(org.bytedeco.javacpp.Pointer fp) |
static lept.L_DNA |
lept.l_dnaRemoveDupsByAset(lept.L_DNA das) |
static lept.L_DNA |
lept.l_dnaUnionByAset(lept.L_DNA da1,
lept.L_DNA da2) |
lept.L_DNA |
lept.L_DNA.n(int n) |
lept.L_DNA |
lept.L_DNA.nalloc(int nalloc) |
static lept.L_DNA |
lept.numaConvertToDna(lept.NUMA na) |
lept.L_DNA |
lept.L_PDF_DATA.objloc()
location of each pdf string object
|
lept.L_DNA |
lept.L_PDF_DATA.objsize()
sizes of each pdf string object
|
lept.L_DNA |
lept.L_DNA.position(long position) |
lept.L_DNA |
lept.L_DNA.refcount(int refcount) |
lept.L_DNA |
lept.L_DNA.startx(double startx) |
| Modifier and Type | Method and Description |
|---|---|
lept.L_RECOG |
lept.L_RECOG.dna_tochar(lept.L_DNA dna_tochar) |
lept.L_DNAA |
lept.L_DNAA.dna(int i,
lept.L_DNA dna) |
lept.L_DNAHASH |
lept.L_DNAHASH.dna(int i,
lept.L_DNA dna) |
static lept.L_ASET |
lept.l_asetCreateFromDna(lept.L_DNA da) |
static int |
lept.l_byteaFindEachSequence(lept.L_BYTEA ba,
byte[] sequence,
int seqlen,
lept.L_DNA pda) |
static int |
lept.l_byteaFindEachSequence(lept.L_BYTEA ba,
ByteBuffer sequence,
int seqlen,
lept.L_DNA pda) |
static int |
lept.l_byteaFindEachSequence(lept.L_BYTEA ba,
org.bytedeco.javacpp.BytePointer sequence,
int seqlen,
lept.L_DNA pda) |
static int |
lept.l_dnaaAddDna(lept.L_DNAA daa,
lept.L_DNA da,
int copyflag) |
static int |
lept.l_dnaAddNumber(lept.L_DNA da,
double val) |
static int |
lept.l_dnaaReplaceDna(lept.L_DNAA daa,
int index,
lept.L_DNA da) |
static int |
lept.l_dnaChangeRefcount(lept.L_DNA da,
int delta) |
static lept.L_DNA |
lept.l_dnaClone(lept.L_DNA da) |
static lept.NUMA |
lept.l_dnaConvertToNuma(lept.L_DNA da) |
static lept.L_DNA |
lept.l_dnaCopy(lept.L_DNA da) |
static int |
lept.l_dnaCopyParameters(lept.L_DNA dad,
lept.L_DNA das) |
static void |
lept.l_dnaDestroy(lept.L_DNA pda) |
static lept.L_DNA |
lept.l_dnaDiffAdjValues(lept.L_DNA das) |
static int |
lept.l_dnaEmpty(lept.L_DNA da) |
static int |
lept.l_dnaFindValByHash(lept.L_DNA da,
lept.L_DNAHASH dahash,
double val,
int[] pindex) |
static int |
lept.l_dnaFindValByHash(lept.L_DNA da,
lept.L_DNAHASH dahash,
double val,
IntBuffer pindex) |
static int |
lept.l_dnaFindValByHash(lept.L_DNA da,
lept.L_DNAHASH dahash,
double val,
org.bytedeco.javacpp.IntPointer pindex) |
static int |
lept.l_dnaGetCount(lept.L_DNA da) |
static org.bytedeco.javacpp.DoublePointer |
lept.l_dnaGetDArray(lept.L_DNA da,
int copyflag) |
static int |
lept.l_dnaGetDValue(lept.L_DNA da,
int index,
double[] pval) |
static int |
lept.l_dnaGetDValue(lept.L_DNA da,
int index,
DoubleBuffer pval) |
static int |
lept.l_dnaGetDValue(lept.L_DNA da,
int index,
org.bytedeco.javacpp.DoublePointer pval) |
static org.bytedeco.javacpp.IntPointer |
lept.l_dnaGetIArray(lept.L_DNA da) |
static int |
lept.l_dnaGetIValue(lept.L_DNA da,
int index,
int[] pival) |
static int |
lept.l_dnaGetIValue(lept.L_DNA da,
int index,
IntBuffer pival) |
static int |
lept.l_dnaGetIValue(lept.L_DNA da,
int index,
org.bytedeco.javacpp.IntPointer pival) |
static int |
lept.l_dnaGetParameters(lept.L_DNA da,
double[] pstartx,
double[] pdelx) |
static int |
lept.l_dnaGetParameters(lept.L_DNA da,
DoubleBuffer pstartx,
DoubleBuffer pdelx) |
static int |
lept.l_dnaGetParameters(lept.L_DNA da,
org.bytedeco.javacpp.DoublePointer pstartx,
org.bytedeco.javacpp.DoublePointer pdelx) |
static int |
lept.l_dnaGetRefcount(lept.L_DNA da) |
static lept.L_DNAHASH |
lept.l_dnaHashCreateFromDna(lept.L_DNA da) |
static int |
lept.l_dnaInsertNumber(lept.L_DNA da,
int index,
double val) |
static lept.L_DNA |
lept.l_dnaIntersectionByAset(lept.L_DNA da1,
lept.L_DNA da2) |
static lept.L_DNA |
lept.l_dnaIntersectionByHash(lept.L_DNA da1,
lept.L_DNA da2) |
static int |
lept.l_dnaJoin(lept.L_DNA dad,
lept.L_DNA das,
int istart,
int iend) |
static int |
lept.l_dnaMakeHistoByHash(lept.L_DNA das,
lept.L_DNAHASH pdahash,
lept.L_DNA pdav,
lept.L_DNA pdac) |
static int |
lept.l_dnaMakeHistoByHash(lept.L_DNA das,
org.bytedeco.javacpp.PointerPointer pdahash,
org.bytedeco.javacpp.PointerPointer pdav,
org.bytedeco.javacpp.PointerPointer pdac) |
static lept.L_DNA |
lept.l_dnaRemoveDupsByAset(lept.L_DNA das) |
static int |
lept.l_dnaRemoveDupsByHash(lept.L_DNA das,
lept.L_DNA pdad,
lept.L_DNAHASH pdahash) |
static int |
lept.l_dnaRemoveDupsByHash(lept.L_DNA das,
org.bytedeco.javacpp.PointerPointer pdad,
org.bytedeco.javacpp.PointerPointer pdahash) |
static int |
lept.l_dnaRemoveNumber(lept.L_DNA da,
int index) |
static int |
lept.l_dnaReplaceNumber(lept.L_DNA da,
int index,
double val) |
static int |
lept.l_dnaSetCount(lept.L_DNA da,
int newcount) |
static int |
lept.l_dnaSetParameters(lept.L_DNA da,
double startx,
double delx) |
static int |
lept.l_dnaSetValue(lept.L_DNA da,
int index,
double val) |
static int |
lept.l_dnaShiftValue(lept.L_DNA da,
int index,
double diff) |
static lept.L_DNA |
lept.l_dnaUnionByAset(lept.L_DNA da1,
lept.L_DNA da2) |
static int |
lept.l_dnaWrite(org.bytedeco.javacpp.BytePointer filename,
lept.L_DNA da) |
static int |
lept.l_dnaWrite(String filename,
lept.L_DNA da) |
static int |
lept.l_dnaWriteStream(org.bytedeco.javacpp.Pointer fp,
lept.L_DNA da) |
lept.L_PDF_DATA |
lept.L_PDF_DATA.objloc(lept.L_DNA objloc) |
lept.L_PDF_DATA |
lept.L_PDF_DATA.objsize(lept.L_DNA objsize) |
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