object Kernels
Provides Markov transition kernels for a few common MCMC techniques
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def
metropolis[T](proposal: (T) ⇒ Rand[T])(logMeasure: (T) ⇒ Double)(implicit rand: RandBasis = Rand): (T) ⇒ Rand[T]
Note this is not Metropolis-Hastings
Note this is not Metropolis-Hastings
- proposal
the symmetric proposal distribution generator
- logMeasure
the distribution we want to sample from
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def
metropolisHastings[T](proposal: (T) ⇒ ContinuousDistr[T])(logMeasure: (T) ⇒ Double)(implicit rand: RandBasis = Rand): (T) ⇒ Rand[T]
- proposal
the proposal distribution generator
- logMeasure
the distribution we want to sample from
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def
slice(logMeasure: (Double) ⇒ Double, valid: (Double) ⇒ Boolean)(implicit rand: RandBasis = Rand): (Double) ⇒ Rand[Double]
Creates a slice sampler for a function.
Creates a slice sampler for a function. logMeasure should be an (unnormalized) log pdf.
- logMeasure
an unnormalized probability measure
- returns
a slice sampler
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